Biology · Microbial Eukaryotes & Algal Diversity
Microbial food webs, blooms and environmental change
A water sample may contain the same number of algal cells on two days even though many cells divided and many were eaten. Following inputs and losses reveals activity that an unchanged count can conceal.
Phylogeny, Classification & the Tree of Life supplies clades and the difference between similarity and ancestry. Earth, Origins & the History of Life supplies endosymbiosis and changing organelle functions. Cells, Membranes & Organisation supplies membrane boundaries and osmosis. Meiosis & Patterns of Inheritance helps with the optional chromosome-accounting exercise, while Energy, Enzymes & Metabolism helps with gross and net production. Numerical rules and units are introduced beside each original example; an earlier chapter's completion is not required to read the qualitative explanations.
Back to the Biology mapBy the end, you can
Trace microbial transfers of carbon, distinguish population turnover from accumulation, and explain why bloom abundance alone does not establish harm or an oxygen outcome.
Microbial eukaryotes connect several routes
Photosynthetic organisms supply new organic carbon to many illuminated aquatic communities. Consumers ingest cells or particles; bacteria use dissolved organic material; microbial eukaryotes can graze on bacteria and other small organisms. Detritus and released material create additional routes. The community is a web rather than one ladder in which every species occupies a permanent step.
The same organism can participate in several processes. A photosynthetic cell that ingests prey has more than one route of carbon acquisition. Its role can change with conditions. Not every microbial food web starts with local sunlight: work at deep-sea hydrothermal vents documents protistan grazing in communities supplied by chemical primary production.
Carbon atoms can return to inorganic forms and later be fixed again. Energy accounting is different: biological transfers dissipate energy as heat, and usable energy is not simply recycled by drawing a carbon loop. The following diagram follows carbon amounts only.
Balance each junction, then the whole model
The original one-pass web begins with 100 assigned units of new producer organic carbon. Thirty remain as producer biomass, 40 enter dissolved organic material and 30 are ingested directly by a protistan grazer. The model follows this one input without later feedback, imports or repeated fixation.
Bacteria process the 40 dissolved units: 10 remain in bacterial biomass, 10 move to the grazer and 20 return as carbon dioxide through respiration. The grazer therefore receives 30 + 10 = 40 units. It adds 12 to its biomass, releases 10 as other organic material and returns 18 as carbon dioxide.
Final organic stocks are 30 in producers, 10 in bacteria, 12 in grazers and 10 in other material, totalling 62. Carbon dioxide accounts for the other 20 + 18 = 38. Together these destinations account for all 100 units. A respiratory loss from an organic-biomass compartment is not disappearance of the carbon atoms.
These numbers are not observed ocean transfers, energy efficiencies or ATP yields. A real web would include further processing, recycling, migration and changing pools. The model is useful because each arrow names a process and amount; it is limited because only the assigned routes are present.
Balance a one-pass microbial carbon web
Read the diagram in words
Of 100 producer units, 30 remain in producer biomass, 40 enter dissolved material and 30 go to the grazer. Bacteria process the 40 dissolved units into 10 bacterial biomass, 10 grazed and 20 carbon dioxide. The grazer receives 40 in total and allocates 12 to its biomass, 10 to other organic material and 18 to carbon dioxide. Final stocks of 30, 10, 12 and 10 sum to 62 organic units; carbon dioxide receives 38, completing the total of 100.
| Model identity | Meaning |
|---|---|
| producer | Assigned producer carbon |
| producer-stock | Remaining producer biomass |
| dissolved | Dissolved organic carbon |
| bacterial-processing | Bacterial processing |
| bacterial-stock | Remaining bacterial biomass |
| grazer | Protistan grazer processing |
| grazer-stock | New grazer biomass |
| detritus | Other remaining organic material |
| co2 | Carbon returned as carbon dioxide |
| From | To | Relationship | Carbon-account amount |
|---|---|---|---|
| Assigned producer carbon | Remaining producer biomass | Final organic stock in this one-pass account | 30 |
| Assigned producer carbon | Dissolved organic carbon | Dissolved or other organic release | 40 |
| Assigned producer carbon | Protistan grazer processing | Ingestion transfers organic material | 30 |
| Dissolved organic carbon | Bacterial processing | Bacterial processing | 40 |
| Bacterial processing | Remaining bacterial biomass | Final organic stock in this one-pass account | 10 |
| Bacterial processing | Protistan grazer processing | Ingestion transfers organic material | 10 |
| Bacterial processing | Carbon returned as carbon dioxide | Respiration returns carbon as carbon dioxide | 20 |
| Protistan grazer processing | New grazer biomass | Final organic stock in this one-pass account | 12 |
| Protistan grazer processing | Other remaining organic material | Dissolved or other organic release | 10 |
| Protistan grazer processing | Carbon returned as carbon dioxide | Respiration returns carbon as carbon dioxide | 18 |
| Meaning | Carbon-account amount |
|---|---|
| Remaining producer biomass | 30 |
| Remaining bacterial biomass | 10 |
| New grazer biomass | 12 |
| Other remaining organic material | 10 |
| Carbon returned as carbon dioxide | 38 |
100 units of new producer organic carbon
No energy or global-efficiency estimate
Assigned carbon-account units
An original one-pass routing of 100 new organic-carbon units from an assigned producer contribution. Dissolved carbon feeds bacteria; grazer intake combines 30 producer units and 10 bacterial units. Remaining organic stocks and carbon dioxide total 100. Carbon units are not energy units, trophic efficiencies, ATP or a fitted ocean dataset; no repeated feedback, external import/export or later refixation is included.
Count new cells and losses separately
The population panel assigns a fixed water parcel beginning with 100 cells. Division adds 80 net new cells, grazing removes 60 and settling removes 20 from the counted parcel. The ending count is still 100. An unchanged count does not imply that division or grazing stopped.
Net new cells avoids counting both daughters as entirely new additions while also retaining their original mother in the account. When one cell divides into two and both remain, the population increases by one. More complex division patterns also require an explicitly consistent count.
In a second case, the assigned new-cell input rises to 180 while the two losses stay 60 and 20. The ending count becomes 200. This supplies a mechanism for accumulation in the model, but real abundance also depends on transport, resource supply, mortality and measurement boundaries.
A bloom is an accumulation of algal abundance relative to the context and baseline used. It is not automatically evidence of toxin production. Some blooms can harm communities through oxygen depletion, shading or other processes even without toxins. Species, conditions and relevant chemical or ecological measurements are needed to assess a particular event.
Production and demand vary through an interval
The oxygen panel is a separate account with different units. Starting at 10 oxygen units, an assigned light interval adds eight by production and removes five by respiration, ending at 13. The following dark interval adds zero and removes six, ending at seven.
Respiration by producers and other organisms can continue when photosynthetic oxygen production is absent. Decomposition of accumulated organic material can increase oxygen demand. The alternative dark interval removes nine rather than six, ending at four from the same starting 13.
The account assigns neither a water volume nor a conversion to oxygen concentration. It omits exchange with air and surrounding water, and gives no saturation level or species tolerance. Seven or four model units therefore cannot establish that a real water body is hypoxic or that a particular animal dies.
Environmental change can affect several terms at once: temperature, mixing, nutrients, light and consumer activity can influence growth or losses. To infer a cause, compare suitable evidence for those terms. A photograph of coloured water may motivate sampling; it does not identify a toxin, measure oxygen or establish a single cause.
Turnover and light–dark oxygen balances
Read the diagram in words
The constant-count path goes 100 to 180 after new cells, to 120 after grazing and back to 100 after settling. The increased-growth path goes 100 to 280 to 220 to 200. The separate oxygen path goes 10 to 13 during the light interval, then to seven in the dark. Alternative dark demand ends at four from the same starting 13.
| Meaning | Starting inventory | Net new cells | Grazing loss | Settling loss | Ending inventory |
|---|---|---|---|---|---|
| High turnover with constant count | 100 | 80 | 60 | 20 | 100 |
| Count increases under changed growth | 100 | 180 | 60 | 20 | 200 |
| Meaning | Account event | Ordered position | Inventory |
|---|---|---|---|
| High turnover with constant count | Starting cells | 0 | 100 |
| High turnover with constant count | After net new cells | 1 | 180 |
| High turnover with constant count | After grazing loss | 2 | 120 |
| High turnover with constant count | After settling loss | 3 | 100 |
| Count increases under changed growth | Starting cells | 0 | 100 |
| Count increases under changed growth | After net new cells | 1 | 280 |
| Count increases under changed growth | After grazing loss | 2 | 220 |
| Count increases under changed growth | After settling loss | 3 | 200 |
| Stage | Oxygen production | Oxygen respiration | Ending inventory |
|---|---|---|---|
| Assigned light interval | 8 | 5 | 13 |
| Following dark interval | 0 | 6 | 7 |
| Meaning | Account event | Ordered position | Inventory |
|---|---|---|---|
| Assigned oxygen sequence | Start | 0 | 10 |
| Assigned oxygen sequence | After light interval | 1 | 13 |
| Assigned oxygen sequence | After dark interval | 2 | 7 |
| Alternative dark demand | Same start of dark interval | 1 | 13 |
| Alternative dark demand | After higher dark demand | 2 | 4 |
| Assigned quantity | Value |
|---|---|
| Starting inventory | 10 |
| Assigned quantity | Value |
|---|---|
| Starting inventory | 13 |
| Oxygen production | 0 |
| Oxygen respiration | 9 |
| Ending inventory | 4 |
Net new cells from division
Grazing and settling remove counted cells
Cell counts and oxygen units are separate quantities
No real oxygen concentration or tolerance threshold supplied
Two separate original accounts: cell-number turnover in a fixed water parcel, and oxygen inventory across assigned light/dark intervals. Growth means net new cells from division, not a doubled count of both daughters; grazing/settling are losses from the counted parcel. Oxygen units are separate and no concentration, exchange, saturation, species tolerance or toxicity is assigned.
Worked example
A steady count and a changing oxygen inventory
The first cell account is 100 + 80 − 60 − 20 = 100. Eighty newly added cells are balanced by 80 lost cells. In the second, 100 + 180 − 60 − 20 = 200. The added input exceeds losses by 100.
The separate oxygen sequence is 10 + 8 − 5 = 13, then 13 + 0 − 6 = 7. The overall change is −3 across both intervals, even though oxygen increased during the light interval. With the alternative dark demand, the final inventory is 13 − 9 = 4, an overall change of −6.
Finally check the carbon web: the bacterial junction balances 40 = 10 + 10 + 20 and the grazer junction 40 = 12 + 10 + 18. The total destinations balance 100 = 30 + 10 + 12 + 10 + 38. The three accounts ask different questions and use distinct quantities.
Check your understanding
Why can a population end at its initial 100 cells despite active division?
Show reasoning
The model adds 80 net new cells while losing 60 to grazing and 20 to settling. Inputs and losses balance. The unchanged stock conceals substantial turnover.
Where do the 100 carbon units end in the one-pass food web?
Show reasoning
Sixty-two remain in assigned organic stocks: 30 producer, 10 bacterial, 12 grazer and 10 other material. Thirty-eight are returned as carbon dioxide. Their sum is 100; carbon has been redistributed rather than destroyed.
Does a high algal count or a final oxygen account of four units prove a toxic or lethal bloom?
Show reasoning
No. Cell abundance does not establish toxin production, and the oxygen model gives no real concentration or species threshold. Harm can also occur without toxins. A particular event requires appropriate organism, chemical and environmental measurements.
What to carry forward
Follow transfers and balances. Abundance is a stock, production and losses are processes, and bloom harm needs evidence beyond colour or cell count.
References
Resources supporting this lesson’s explanations and examples.
- Mixoplankton and mixotrophy: future research priorities (Journal of Plankton Research 45:576–596 (2023); doi:10.1093/plankt/fbad020)Nicole C. Millette and colleaguesResearch review · PDF
- Protistan grazing impacts microbial communities and carbon cycling at deep-sea hydrothermal vents (PNAS 118(29):e2102674118 (2021); doi:10.1073/pnas.2102674118)Sarah K. Hu and colleaguesResearch abstract
- Are all algal blooms harmful? (Online facts resource inspected 12 October 2026)NOAA National Ocean ServiceOfficial educational explanation