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Biology · Microbial Eukaryotes & Algal Diversity

Microbial food webs, blooms and environmental change

A water sample may contain the same number of algal cells on two days even though many cells divided and many were eaten. Following inputs and losses reveals activity that an unchanged count can conceal.

Phylogeny, Classification & the Tree of Life supplies clades and the difference between similarity and ancestry. Earth, Origins & the History of Life supplies endosymbiosis and changing organelle functions. Cells, Membranes & Organisation supplies membrane boundaries and osmosis. Meiosis & Patterns of Inheritance helps with the optional chromosome-accounting exercise, while Energy, Enzymes & Metabolism helps with gross and net production. Numerical rules and units are introduced beside each original example; an earlier chapter's completion is not required to read the qualitative explanations.

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By the end, you can

Trace microbial transfers of carbon, distinguish population turnover from accumulation, and explain why bloom abundance alone does not establish harm or an oxygen outcome.

01

Microbial eukaryotes connect several routes

Photosynthetic organisms supply new organic carbon to many illuminated aquatic communities. Consumers ingest cells or particles; bacteria use dissolved organic material; microbial eukaryotes can graze on bacteria and other small organisms. Detritus and released material create additional routes. The community is a web rather than one ladder in which every species occupies a permanent step.

The same organism can participate in several processes. A photosynthetic cell that ingests prey has more than one route of carbon acquisition. Its role can change with conditions. Not every microbial food web starts with local sunlight: work at deep-sea hydrothermal vents documents protistan grazing in communities supplied by chemical primary production.

Carbon atoms can return to inorganic forms and later be fixed again. Energy accounting is different: biological transfers dissipate energy as heat, and usable energy is not simply recycled by drawing a carbon loop. The following diagram follows carbon amounts only.

02

Balance each junction, then the whole model

The original one-pass web begins with 100 assigned units of new producer organic carbon. Thirty remain as producer biomass, 40 enter dissolved organic material and 30 are ingested directly by a protistan grazer. The model follows this one input without later feedback, imports or repeated fixation.

Bacteria process the 40 dissolved units: 10 remain in bacterial biomass, 10 move to the grazer and 20 return as carbon dioxide through respiration. The grazer therefore receives 30 + 10 = 40 units. It adds 12 to its biomass, releases 10 as other organic material and returns 18 as carbon dioxide.

Final organic stocks are 30 in producers, 10 in bacteria, 12 in grazers and 10 in other material, totalling 62. Carbon dioxide accounts for the other 20 + 18 = 38. Together these destinations account for all 100 units. A respiratory loss from an organic-biomass compartment is not disappearance of the carbon atoms.

These numbers are not observed ocean transfers, energy efficiencies or ATP yields. A real web would include further processing, recycling, migration and changing pools. The model is useful because each arrow names a process and amount; it is limited because only the assigned routes are present.

Balance a one-pass microbial carbon web

Balance a one-pass microbial carbon webAn original network routes 100 organic-carbon units through producers, dissolved material, bacteria and a protistan grazer, ending in organic stocks and carbon dioxide.Assigned carbon-account units1 · 302 · 403 · 304 · 405 · 106 · 107 · 208 · 129 · 1010 · 181234567891. Assigned producer carbon2. Remaining producer biomass3. Dissolved organic carbon4. Bacterial processing5. Remaining bacterial biomass6. Protistan grazer processing7. New grazer biomass8. Other remaining organic material9. Carbon returned as carbon dioxide1. 1 → 2 · Final organic stock in this one-passaccount · 302. 1 → 3 · Dissolved or other organic release · 403. 1 → 6 · Ingestion transfers organic material ·304. 3 → 4 · Bacterial processing · 405. 4 → 5 · Final organic stock in this one-passaccount · 106. 4 → 6 · Ingestion transfers organic material ·107. 4 → 9 · Respiration returns carbon as carbondioxide · 208. 6 → 7 · Final organic stock in this one-passaccount · 129. 6 → 8 · Dissolved or other organic release · 1010. 6 → 9 · Respiration returns carbon as carbondioxide · 18Remaining producer biomass: 30Remaining bacterial biomass: 10New grazer biomass: 12Other remaining organic material: 10Carbon returned as carbon dioxide: 38100 units of new producer organic carbon62 organic units + 38 carbon-dioxide units = 100No energy or global-efficiency estimate
Arrows represent carbon amounts and named processes, not recycled usable energy. This constructed routing omits later processing, transport and repeated fixation.
Read the diagram in words

Of 100 producer units, 30 remain in producer biomass, 40 enter dissolved material and 30 go to the grazer. Bacteria process the 40 dissolved units into 10 bacterial biomass, 10 grazed and 20 carbon dioxide. The grazer receives 40 in total and allocates 12 to its biomass, 10 to other organic material and 18 to carbon dioxide. Final stocks of 30, 10, 12 and 10 sum to 62 organic units; carbon dioxide receives 38, completing the total of 100.

Balance a one-pass microbial carbon web
Model identityMeaning
producerAssigned producer carbon
producer-stockRemaining producer biomass
dissolvedDissolved organic carbon
bacterial-processingBacterial processing
bacterial-stockRemaining bacterial biomass
grazerProtistan grazer processing
grazer-stockNew grazer biomass
detritusOther remaining organic material
co2Carbon returned as carbon dioxide
Balance a one-pass microbial carbon web
FromToRelationshipCarbon-account amount
Assigned producer carbonRemaining producer biomassFinal organic stock in this one-pass account30
Assigned producer carbonDissolved organic carbonDissolved or other organic release40
Assigned producer carbonProtistan grazer processingIngestion transfers organic material30
Dissolved organic carbonBacterial processingBacterial processing40
Bacterial processingRemaining bacterial biomassFinal organic stock in this one-pass account10
Bacterial processingProtistan grazer processingIngestion transfers organic material10
Bacterial processingCarbon returned as carbon dioxideRespiration returns carbon as carbon dioxide20
Protistan grazer processingNew grazer biomassFinal organic stock in this one-pass account12
Protistan grazer processingOther remaining organic materialDissolved or other organic release10
Protistan grazer processingCarbon returned as carbon dioxideRespiration returns carbon as carbon dioxide18
62 organic units + 38 carbon-dioxide units = 100
MeaningCarbon-account amount
Remaining producer biomass30
Remaining bacterial biomass10
New grazer biomass12
Other remaining organic material10
Carbon returned as carbon dioxide38

100 units of new producer organic carbon

No energy or global-efficiency estimate

Assigned carbon-account units

An original one-pass routing of 100 new organic-carbon units from an assigned producer contribution. Dissolved carbon feeds bacteria; grazer intake combines 30 producer units and 10 bacterial units. Remaining organic stocks and carbon dioxide total 100. Carbon units are not energy units, trophic efficiencies, ATP or a fitted ocean dataset; no repeated feedback, external import/export or later refixation is included.

03

Count new cells and losses separately

The population panel assigns a fixed water parcel beginning with 100 cells. Division adds 80 net new cells, grazing removes 60 and settling removes 20 from the counted parcel. The ending count is still 100. An unchanged count does not imply that division or grazing stopped.

Net new cells avoids counting both daughters as entirely new additions while also retaining their original mother in the account. When one cell divides into two and both remain, the population increases by one. More complex division patterns also require an explicitly consistent count.

In a second case, the assigned new-cell input rises to 180 while the two losses stay 60 and 20. The ending count becomes 200. This supplies a mechanism for accumulation in the model, but real abundance also depends on transport, resource supply, mortality and measurement boundaries.

A bloom is an accumulation of algal abundance relative to the context and baseline used. It is not automatically evidence of toxin production. Some blooms can harm communities through oxygen depletion, shading or other processes even without toxins. Species, conditions and relevant chemical or ecological measurements are needed to assess a particular event.

04

Production and demand vary through an interval

The oxygen panel is a separate account with different units. Starting at 10 oxygen units, an assigned light interval adds eight by production and removes five by respiration, ending at 13. The following dark interval adds zero and removes six, ending at seven.

Respiration by producers and other organisms can continue when photosynthetic oxygen production is absent. Decomposition of accumulated organic material can increase oxygen demand. The alternative dark interval removes nine rather than six, ending at four from the same starting 13.

The account assigns neither a water volume nor a conversion to oxygen concentration. It omits exchange with air and surrounding water, and gives no saturation level or species tolerance. Seven or four model units therefore cannot establish that a real water body is hypoxic or that a particular animal dies.

Environmental change can affect several terms at once: temperature, mixing, nutrients, light and consumer activity can influence growth or losses. To infer a cause, compare suitable evidence for those terms. A photograph of coloured water may motivate sampling; it does not identify a toxin, measure oxygen or establish a single cause.

Turnover and light–dark oxygen balances

Turnover and light–dark oxygen balancesOne panel compares constant and rising cell counts; a separate panel follows oxygen inventory through light and dark intervals using different units.Cells in the fixed parcel01002003000123Ordered account events1. High turnover with constant count2. Count increases under changed growth0. Starting cells1. After net new cells2. After grazing loss3. After settling lossNet new cells from divisionGrazing and settling remove counted cellsCell counts and oxygen units are separatequantitiesOxygen-account inventory051015012Ordered light and dark intervals1. Assigned oxygen sequence2. Alternative dark demandLight: production 8, respiration 5Dark: production 0, respiration 6Alternative dark respiration: 9No real oxygen concentration or tolerancethreshold supplied
A constant cell stock can conceal turnover. Oxygen outcomes depend on both production and demand; these units do not establish toxin production, hypoxia or a lethal threshold.
Read the diagram in words

The constant-count path goes 100 to 180 after new cells, to 120 after grazing and back to 100 after settling. The increased-growth path goes 100 to 280 to 220 to 200. The separate oxygen path goes 10 to 13 during the light interval, then to seven in the dark. Alternative dark demand ends at four from the same starting 13.

Cells in the fixed parcel
MeaningStarting inventoryNet new cellsGrazing lossSettling lossEnding inventory
High turnover with constant count100806020100
Count increases under changed growth1001806020200
Ordered account events
MeaningAccount eventOrdered positionInventory
High turnover with constant countStarting cells0100
High turnover with constant countAfter net new cells1180
High turnover with constant countAfter grazing loss2120
High turnover with constant countAfter settling loss3100
Count increases under changed growthStarting cells0100
Count increases under changed growthAfter net new cells1280
Count increases under changed growthAfter grazing loss2220
Count increases under changed growthAfter settling loss3200
Oxygen-account inventory
StageOxygen productionOxygen respirationEnding inventory
Assigned light interval8513
Following dark interval067
Ordered light and dark intervals
MeaningAccount eventOrdered positionInventory
Assigned oxygen sequenceStart010
Assigned oxygen sequenceAfter light interval113
Assigned oxygen sequenceAfter dark interval27
Alternative dark demandSame start of dark interval113
Alternative dark demandAfter higher dark demand24
Oxygen-account inventory
Assigned quantityValue
Starting inventory10
Alternative dark respiration: 9
Assigned quantityValue
Starting inventory13
Oxygen production0
Oxygen respiration9
Ending inventory4

Net new cells from division

Grazing and settling remove counted cells

Cell counts and oxygen units are separate quantities

No real oxygen concentration or tolerance threshold supplied

Two separate original accounts: cell-number turnover in a fixed water parcel, and oxygen inventory across assigned light/dark intervals. Growth means net new cells from division, not a doubled count of both daughters; grazing/settling are losses from the counted parcel. Oxygen units are separate and no concentration, exchange, saturation, species tolerance or toxicity is assigned.

Worked example

A steady count and a changing oxygen inventory

The first cell account is 100 + 80 − 60 − 20 = 100. Eighty newly added cells are balanced by 80 lost cells. In the second, 100 + 180 − 60 − 20 = 200. The added input exceeds losses by 100.

The separate oxygen sequence is 10 + 8 − 5 = 13, then 13 + 0 − 6 = 7. The overall change is −3 across both intervals, even though oxygen increased during the light interval. With the alternative dark demand, the final inventory is 13 − 9 = 4, an overall change of −6.

Finally check the carbon web: the bacterial junction balances 40 = 10 + 10 + 20 and the grazer junction 40 = 12 + 10 + 18. The total destinations balance 100 = 30 + 10 + 12 + 10 + 38. The three accounts ask different questions and use distinct quantities.

Check your understanding

  1. Why can a population end at its initial 100 cells despite active division?

    Show reasoning

    The model adds 80 net new cells while losing 60 to grazing and 20 to settling. Inputs and losses balance. The unchanged stock conceals substantial turnover.

  2. Where do the 100 carbon units end in the one-pass food web?

    Show reasoning

    Sixty-two remain in assigned organic stocks: 30 producer, 10 bacterial, 12 grazer and 10 other material. Thirty-eight are returned as carbon dioxide. Their sum is 100; carbon has been redistributed rather than destroyed.

  3. Does a high algal count or a final oxygen account of four units prove a toxic or lethal bloom?

    Show reasoning

    No. Cell abundance does not establish toxin production, and the oxygen model gives no real concentration or species threshold. Harm can also occur without toxins. A particular event requires appropriate organism, chemical and environmental measurements.

What to carry forward

Follow transfers and balances. Abundance is a stock, production and losses are processes, and bloom harm needs evidence beyond colour or cell count.

References

Resources supporting this lesson’s explanations and examples.

  1. Mixoplankton and mixotrophy: future research priorities (Journal of Plankton Research 45:576–596 (2023); doi:10.1093/plankt/fbad020)Nicole C. Millette and colleaguesResearch review · PDFrepository.library.noaa.govRead source
  2. Protistan grazing impacts microbial communities and carbon cycling at deep-sea hydrothermal vents (PNAS 118(29):e2102674118 (2021); doi:10.1073/pnas.2102674118)Sarah K. Hu and colleaguesResearch abstractpubmed.ncbi.nlm.nih.govRead source
  3. Are all algal blooms harmful? (Online facts resource inspected 12 October 2026)NOAA National Ocean ServiceOfficial educational explanationoceanservice.noaa.govRead source